Crystal structure of a mandelate racemase (muconate lactonizing enzyme family protein) from Roseovarius nubinhibens
Eswaramoorthy, S., Kumaran, D., Almo, S.C., Swaminathan, S.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Mandelate racemase/muconate lactonizing enzyme family protein | 388 | Roseovarius nubinhibens ISM | Mutation(s): 0  Gene Names: ISM_12500 | ![]() | |
UniProt | |||||
Find proteins for A3SMJ4 (Roseovarius nubinhibens (strain ATCC BAA-591 / DSM 15170 / ISM)) Explore A3SMJ4  Go to UniProtKB:  A3SMJ4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A3SMJ4 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GAI Query on GAI | F [auth A], I [auth B], L [auth C], O [auth D] | GUANIDINE C H5 N3 ZRALSGWEFCBTJO-UHFFFAOYSA-N | |||
MG Query on MG | E [auth A] G [auth A] H [auth B] J [auth B] K [auth C] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 125.871 | α = 90 |
b = 125.871 | β = 90 |
c = 98.017 | γ = 120 |
Software Name | Purpose |
---|---|
CBASS | data collection |
MOLREP | phasing |
REFMAC | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |