3TVT | pdb_00003tvt

Structural basis for Discs Large interaction with Pins

PDB DOI: https://doi.org/10.2210/pdb3TVT/pdb

Classification: ANTITUMOR PROTEIN/PROTEIN BINDING
Organism(s): Drosophila melanogaster
Expression System: Escherichia coli BL21(DE3)
Mutation(s): Yes

Deposited: 2011-09-20 Released: 2012-08-08
Deposition Author(s): Johnston, C.A., Doe, C.Q., Prehoda, K.E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.60 Å
R-Value Free:
0.245 (Depositor), 0.247 (DCC)
R-Value Work:
0.220 (Depositor), 0.226 (DCC)
R-Value Observed:
0.221 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 3TVT

This is version 1.2 of the entry. See complete history.

Literature

Structural basis for Discs Large interaction with Pins

Johnston, C.A., Doe, C.Q., Prehoda, K.E.

To be published.

Macromolecule Content

Total Structure Weight: 39.59 kDa
Atom Count: 2,434
Modeled Residue Count: 269
Deposited Residue Count: 342
Unique protein chains: 2

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Disks large 1 tumor suppressor protein	A	292	Drosophila melanogaster	Mutation(s): 0 Gene Names: dlg1, l(1)dlg1, CG1725
UniProt
Find proteins for P31007 (Drosophila melanogaster) Explore P31007 Go to UniProtKB: P31007
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P31007
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Partner of Inscuteable	B	50	Drosophila melanogaster	Mutation(s): 1 Gene Names: raps, pins, CG5692
UniProt
Find proteins for Q9VB22 (Drosophila melanogaster) Explore Q9VB22 Go to UniProtKB: Q9VB22
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9VB22
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.60 Å
R-Value Free: 0.245 (Depositor), 0.247 (DCC)
R-Value Work: 0.220 (Depositor), 0.226 (DCC)
R-Value Observed: 0.221 (Depositor)

Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 91.604	α = 90
b = 94.546	β = 90
c = 83.7	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data collection
PHASER	phasing
REFMAC	refinement
HKL-2000	data reduction
HKL-2000	data scaling

Structure Validation

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Entry History

Deposition Data

Released Date: 2012-08-08

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2012-08-08
Type: Initial release
Version 1.1: 2017-07-26
Changes: Refinement description, Source and taxonomy
Version 1.2: 2024-02-28
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.