Transglutaminase 2 in complex with a novel inhibitor
Lindemann, I., Boettcher, J., Oertel, K., Weber, J., Hils, M., Pasternack, R., Heine, A., Klebe, G.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein-glutamine gamma-glutamyltransferase 2 | 694 | Homo sapiens | Mutation(s): 0  Gene Names: TGM2 EC: 2.3.2.13 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P21980 (Homo sapiens) Explore P21980  Go to UniProtKB:  P21980 | |||||
PHAROS:  P21980 GTEx:  ENSG00000198959  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P21980 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peptide inhibitor | 5 | synthetic construct | Mutation(s): 0  | ![]() | |
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | C [auth A] D [auth A] E [auth A] F [auth A] G [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
XW1 Query on XW1 | B | L-PEPTIDE LINKING | C9 H17 N O4 | ALA |
Entity ID: 2 | |||||
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ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_001095 Query on PRD_001095 | B | N~2~-[(2S)-2-{[(benzyloxy)carbonyl]amino}-7-ethoxy-7-oxoheptanoyl]-L-glutaminyl-L-prolyl-L-leucine | Peptide-like / Inhibitor |
Length ( Å ) | Angle ( ˚ ) |
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a = 71 | α = 90 |
b = 71 | β = 90 |
c = 310.36 | γ = 90 |
Software Name | Purpose |
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MAR345dtb | data collection |
PHASER | phasing |
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |