3R86

Crystal structure of d(CCGGTACCGG)2 as B-DNA duplex grown with 5 mM CoCl2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.270 
  • R-Value Work: 0.260 
  • R-Value Observed: 0.276 

Starting Model: other
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This is version 1.4 of the entry. See complete history


Literature

Crystal structure of d(CCGGTACCGG)2 as B-DNA duplex

Venkadesh, S.Mandal, P.K.Gautham, N.

To be published.

Macromolecules

Find similar nucleic acids by:  Sequence   |   3D Structure  

Entity ID: 1
MoleculeChains LengthOrganismImage
DNA (5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3')
A, B
10N/A
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.270 
  • R-Value Work: 0.260 
  • R-Value Observed: 0.276 
  • Space Group: P 61
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 32.756α = 90
b = 32.756β = 90
c = 93.648γ = 120
Software Package:
Software NamePurpose
MxCuBEdata collection
AMoREphasing
REFMACrefinement
AUTOMARdata reduction

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2011-04-06
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2018-02-14
    Changes: Experimental preparation
  • Version 1.3: 2024-03-20
    Changes: Data collection, Database references, Derived calculations
  • Version 1.4: 2024-04-03
    Changes: Refinement description