The structure of calcium bound Thermococcus thioreducens inorganic pyrophosphatase at 298K
Hughes, R.C., Meehan, E.J., Coates, L., Ng, J.D.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Tt-IPPase | 178 | Thermococcus thioreducens | Mutation(s): 0  Gene Names: Tt-IPPase | ||
UniProt | |||||
Find proteins for H0USY5 (Thermococcus thioreducens) Explore H0USY5  Go to UniProtKB:  H0USY5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | H0USY5 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MPD Query on MPD | J [auth C] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N | |||
MRD Query on MRD | I [auth C], O [auth F] | (4R)-2-METHYLPENTANE-2,4-DIOL C6 H14 O2 SVTBMSDMJJWYQN-RXMQYKEDSA-N | |||
CA Query on CA | G [auth A] H [auth B] K [auth C] L [auth D] M [auth E] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 106.092 | α = 90 |
b = 95.564 | β = 98.1 |
c = 113.769 | γ = 90 |
Software Name | Purpose |
---|---|
SCALEPACK | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data collection |
DENZO | data reduction |
PHENIX | phasing |