3Q4N | pdb_00003q4n

Crystal structure of hypothetical protein MJ0754 from Methanococcus jannaschii DSM 2661

PDB DOI: https://doi.org/10.2210/pdb3Q4N/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Methanocaldococcus jannaschii DSM 2661
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2010-12-24 Released: 2011-05-18
Deposition Author(s): Hwang, K.Y., Lee, E.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.88 Å
R-Value Free:
0.257 (Depositor), 0.245 (DCC)
R-Value Work:
0.204 (Depositor), 0.202 (DCC)
R-Value Observed:
0.206 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 3Q4N

This is version 1.3 of the entry. See complete history.

Literature

Structural insights into the metal binding properties of hypothetical protein MJ0754 from Methanococcus jannaschii.

Lee, E.H., Kim, H.S., Kim, H.Y., Jeon, Y.H., Hwang, K.Y.

(2011) Proteins 79: 2358-2363

PubMed: 21604308 Search on PubMed
DOI: https://doi.org/10.1002/prot.23066
Primary Citation Related Structures:
3Q4N, 3Q4O, 3Q4Q, 3Q4R

Organizational Affiliation

Division of Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul 136-713, Korea.

Macromolecule Content

Total Structure Weight: 45.73 kDa
Atom Count: 2,839
Modeled Residue Count: 344
Deposited Residue Count: 386
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein MJ0754	A, B	193	Methanocaldococcus jannaschii DSM 2661	Mutation(s): 0 Gene Names: MJ0754
UniProt
Find proteins for Q58164 (Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)) Explore Q58164 Go to UniProtKB: Q58164
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q58164
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.88 Å
R-Value Free: 0.257 (Depositor), 0.245 (DCC)
R-Value Work: 0.204 (Depositor), 0.202 (DCC)
R-Value Observed: 0.206 (Depositor)

Space Group: P 6₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 127.015	α = 90
b = 127.015	β = 90
c = 48.929	γ = 120

Software Package:

Software Name	Purpose
REFMAC	refinement
PDB_EXTRACT	data extraction
HKL-2000	data collection
HKL-2000	data reduction
HKL-2000	data scaling
SOLVE	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2011-05-18

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2011-05-18
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2020-01-01
Changes: Database references
Version 1.3: 2024-03-20
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.