3O3V | pdb_00003o3v

Crystal structure of ClbP peptidase domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 
    0.241 (Depositor), 0.235 (DCC) 
  • R-Value Work: 
    0.204 (Depositor), 0.201 (DCC) 
  • R-Value Observed: 
    0.206 (Depositor) 

wwPDB Validation 3D Report Full Report

Validation slider image for 3O3V

This is version 1.1 of the entry. See complete history

Literature

ClbP x-ray structure, the prototype of a peptidase family associated to NRP production

Dubois, D.Baron, O.Cougnoux, A.Delmas, J.Pradel, N.Nougayrede, J.P.Robin, F.Oswald, E.Bonnet, R.

To be published.

Macromolecule Content 

  • Total Structure Weight: 110.4 kDa 
  • Atom Count: 7,968 
  • Modeled Residue Count: 1,005 
  • Deposited Residue Count: 1,005 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
beta-lactamase
A, B, C
335Escherichia coli IHE3034Mutation(s): 0 
Gene Names: clbpECOK1_2171
EC: 3.5.2.6

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free:  0.241 (Depositor), 0.235 (DCC) 
  • R-Value Work:  0.204 (Depositor), 0.201 (DCC) 
  • R-Value Observed: 0.206 (Depositor) 
Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 103.94α = 90
b = 149.93β = 123.9
c = 87.33γ = 90
Software Package:
Software NamePurpose
DNAdata collection
PHASERphasing
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2011-07-27
    Type: Initial release
  • Version 1.1: 2024-11-27
    Changes: Data collection, Database references, Structure summary