Structure-function analysis of human L-Prostaglandin D Synthase bound with fatty acid
Zhou, Y., Shaw, N., Li, Y., Zhao, Y., Zhang, R., Liu, Z.-J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Prostaglandin-H2 D-isomerase | 162 | Homo sapiens | Mutation(s): 1  Gene Names: PTGDS, PDS EC: 5.3.99.2 Membrane Entity: Yes  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P41222 (Homo sapiens) Explore P41222  Go to UniProtKB:  P41222 | |||||
PHAROS:  P41222 GTEx:  ENSG00000107317  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P41222 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
OLA Query on OLA | B [auth A], D [auth A] | OLEIC ACID C18 H34 O2 ZQPPMHVWECSIRJ-KTKRTIGZSA-N | |||
PLM Query on PLM | C [auth A], E [auth A] | PALMITIC ACID C16 H32 O2 IPCSVZSSVZVIGE-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 60.971 | α = 90 |
b = 60.971 | β = 90 |
c = 179.46 | γ = 120 |
Software Name | Purpose |
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HKL-2000 | data collection |
CNS | refinement |
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
CNS | phasing |