3NKJ | pdb_00003nkj

Crystal Structure of HP67 L61G

• PDB DOI: https://doi.org/10.2210/pdb3NKJ/pdb

• Classification: STRUCTURAL PROTEIN
• Organism(s): Gallus gallus
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): Yes 


• Deposited: 2010-06-20 Released: 2011-06-01 
• Deposition Author(s): Brown, J.W., Farelli, J.D., McKnight, C.J.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.60 Å
• R-Value Free: 
  0.219 (Depositor), 0.213 (DCC) 
• R-Value Work: 
  0.182 (Depositor), 0.176 (DCC) 
• R-Value Observed: 
  0.185 (Depositor) 

Starting Model: experimental

Literature

Conserving the Hydrophobic Core at the Expense of Backbone Conformation in Villin Headpiece

Brown, J.W., Farelli, J.D., McKnight, C.J.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 7.56 kDa 
• Atom Count: 641 
• Modeled Residue Count: 64 
• Deposited Residue Count: 67 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Villin-1	A	67	Gallus gallus	Mutation(s): 1  Gene Names: VIL1, VIL
UniProt
Find proteins for P02640 (Gallus gallus) Explore P02640  Go to UniProtKB:  P02640

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.60 Å
• R-Value Free:  0.219 (Depositor), 0.213 (DCC) 
• R-Value Work:  0.182 (Depositor), 0.176 (DCC) 
• R-Value Observed: 0.185 (Depositor) 

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 30.041	α = 90
b = 39.544	β = 90
c = 51.396	γ = 90

Software Package:

Software Name	Purpose
CrystalClear	data collection
PHENIX	model building
PHENIX	refinement
DENZO	data reduction
SCALEPACK	data scaling
PHENIX	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2011-06-01 
Deposition Author(s): Brown, J.W., Farelli, J.D., McKnight, C.J.

Revision History  

• Version 1.0: 2011-06-01
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2023-09-06
  Changes: Data collection, Database references, Refinement description