3N4G | pdb_00003n4g

Crystal structure of native Cg10062

• PDB DOI: https://doi.org/10.2210/pdb3N4G/pdb

• Classification: HYDROLASE
• Organism(s): Corynebacterium glutamicum
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2010-05-21 Released: 2011-06-01 
• Deposition Author(s): Guo, Y., Robertson, B.A., Hackert, M.L., Whitman, C.P.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.44 Å
• R-Value Free: 
  0.259 (Depositor), 0.243 (DCC) 
• R-Value Work: 
  0.209 (Depositor), 0.228 (DCC) 
• R-Value Observed: 
  0.211 (Depositor) 

Starting Model: experimental

Literature

Crystal Structures of the Native and Inactivated Cg10062, a cis-3-Chloroacrylic Acid Dehalogenase from Corynebacterium glutamicum: Implications for the Evolution of cis-3-Chloroacrylic Acid Dehalogenase Activity in the Tautomerase Superfamily

Guo, Y., Robertson, B.A., J Poelarends, G., Thunnissen, A.-M.W.H., Whitman, C.P., Hackert, M.L., Dijkstra, B.W.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C3  (Explore in 3D)
Global Stoichiometry: Homo 3-mer - A3 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 51.35 kDa 
• Atom Count: 3,692 
• Modeled Residue Count: 432 
• Deposited Residue Count: 444 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative tautomerase	A, B, C	148	Corynebacterium glutamicum	Mutation(s): 0  Gene Names: cg0081, Cg10062, Cgl0062 EC: 3.8.1
UniProt
Find proteins for Q8NU77 (Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)) Explore Q8NU77  Go to UniProtKB:  Q8NU77

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.44 Å
• R-Value Free:  0.259 (Depositor), 0.243 (DCC) 
• R-Value Work:  0.209 (Depositor), 0.228 (DCC) 
• R-Value Observed: 0.211 (Depositor) 

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 104.097	α = 90
b = 40.69	β = 94.96
c = 89.938	γ = 90

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
REFMAC	refinement
PDB_EXTRACT	data extraction
CrystalClear	data collection
HKL-2000	data reduction
CaspR	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2011-06-01 
Deposition Author(s): Guo, Y., Robertson, B.A., Hackert, M.L., Whitman, C.P.

Revision History  

• Version 1.0: 2011-06-01
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2017-11-08
  Changes: Advisory, Refinement description
• Version 1.3: 2018-01-24
  Changes: Database references
• Version 1.4: 2023-09-06
  Changes: Advisory, Data collection, Database references, Refinement description