Crystal structure of Toxic Shock Syndrome Toxin 1 (TSST-1) in complex with the human T cell receptor beta chain Vbeta2.1 (EP-8)
Bonsor, D.A., Sundberg, E.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Toxic shock syndrome toxin-1 | 194 | Staphylococcus aureus subsp. aureus N315 | Mutation(s): 0  Gene Names: tst, SA1819 | ||
UniProt | |||||
Find proteins for A0A0H3JMU6 (Staphylococcus aureus (strain N315)) Explore A0A0H3JMU6  Go to UniProtKB:  A0A0H3JMU6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0H3JMU6 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
V_segment translation product | 118 | Homo sapiens | Mutation(s): 0  Gene Names: TCRBV2S1 | ||
UniProt | |||||
Find proteins for A0A5B4 (Homo sapiens) Explore A0A5B4  Go to UniProtKB:  A0A5B4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A5B4 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | C [auth A], D [auth B], E [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | F [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 242.62 | α = 90 |
b = 242.62 | β = 90 |
c = 47.14 | γ = 90 |
Software Name | Purpose |
---|---|
MOSFLM | data reduction |
SCALA | data scaling |
PHASER | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
Blu-Ice | data collection |