3M70 | pdb_00003m70

Crystal Structure of TehB from Haemophilus influenzae

PDB DOI: https://doi.org/10.2210/pdb3M70/pdb

Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Organism(s): Haemophilus influenzae
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2010-03-16 Released: 2010-05-12
Deposition Author(s): Chen, Y.-H., Hendrickson, W.A., New York Consortium on Membrane Protein Structure (NYCOMPS)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.95 Å
R-Value Free:
0.230 (Depositor), 0.243 (DCC)
R-Value Work:
0.187 (Depositor), 0.209 (DCC)
R-Value Observed:
0.189 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 3M70

This is version 1.3 of the entry. See complete history.

Literature

Crystal Structure of TehB from Haemophilus influenzae

Chen, Y.-H., Hendrickson, W.A.

To be published.

Macromolecule Content

Total Structure Weight: 33.48 kDa
Atom Count: 2,547
Modeled Residue Count: 286
Deposited Residue Count: 286
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Tellurite resistance protein tehB homolog	A	286	Haemophilus influenzae	Mutation(s): 0 Gene Names: HI1275, Rd, tehB EC: 2.1.1
UniProt
Find proteins for P45134 (Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)) Explore P45134 Go to UniProtKB: P45134
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P45134
Sequence Annotations Expand
Reference Sequence

Small Molecules

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.95 Å
R-Value Free: 0.230 (Depositor), 0.243 (DCC)
R-Value Work: 0.187 (Depositor), 0.209 (DCC)
R-Value Observed: 0.189 (Depositor)

Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 90.488	α = 90
b = 170.217	β = 90
c = 55.321	γ = 90

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
REFMAC	refinement
PDB_EXTRACT	data extraction
SHELXS	phasing

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2010-05-12

Deposition Author(s):

Hendrickson, W.A.

New York Consortium on Membrane Protein Structure (NYCOMPS)

Revision History (Full details and data files)

Version 1.0: 2010-05-12
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2017-11-08
Changes: Refinement description
Version 1.3: 2024-11-20
Changes: Data collection, Database references, Derived calculations, Structure summary

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.