Beta-N-hexosaminidase N318D mutant (YBBD_N318D) from bacillus subtilis
Krug, M., Fischer, S., Diederichs, K., Boos, W., Mayer, C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Lipoprotein ybbD | 616 | Bacillus subtilis | Mutation(s): 1  Gene Names: BSU01660, ybbD, yzbA | ![]() | |
UniProt | |||||
Find proteins for P40406 (Bacillus subtilis (strain 168)) Explore P40406  Go to UniProtKB:  P40406 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P40406 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PEG Query on PEG | E [auth A] F [auth A] G [auth A] H [auth A] J [auth B] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
NA Query on NA | AA [auth D], I [auth A], P [auth B], V [auth C] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 56.315 | α = 90.11 |
b = 99.149 | β = 90.05 |
c = 139.861 | γ = 89.94 |
Software Name | Purpose |
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XDS | data scaling |
PHASER | phasing |
PHENIX | refinement |
XDS | data reduction |