3KAY

Crystal structure of abscisic acid receptor PYL1

PDB DOI: https://doi.org/10.2210/pdb3KAY/pdb

Classification: SIGNALING PROTEIN
Organism(s): Arabidopsis thaliana
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2009-10-19 Released: 2009-12-08
Deposition Author(s): Zhou, X.E., Melcher, K., Ng, L.-M., Soon, F.-F., Xu, Y., Suino-Powell, K.M., Kovach, A., Li, J., Xu, H.E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.40 Å
R-Value Free: 0.248
R-Value Work: 0.217
R-Value Observed: 0.219

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Agate-latch-lock mechanism for hormone signalling by abscisic acid receptors

Melcher, K., Ng, L.-M., Zhou, X.E., Soon, F.-F., Xu, Y., Suino-Powell, K.-M., Park, S.-Y., Weiner, J.J., Fujii, H., Chinnusamy, V., Kovach, A., Li, J., Wang, Y., Li, J.Y., Peterson, F.C., Jensen, D.R., Yong, E.-L., Volkman, B.F., Cutler, S.R., Zhu, J.-K., Xu, H.E.

(2009) Nature 462: 602-608

Macromolecule Content

Total Structure Weight: 41.07 kDa
Atom Count: 2,922
Modelled Residue Count: 345
Deposited Residue Count: 356
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative uncharacterized protein At5g46790	A, B	178	Arabidopsis thaliana	Mutation(s): 0 Gene Names: At5g46790
UniProt
Find proteins for Q8VZS8 (Arabidopsis thaliana) Explore Q8VZS8 Go to UniProtKB: Q8VZS8
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q8VZS8
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.40 Å
R-Value Free: 0.248
R-Value Work: 0.217
R-Value Observed: 0.219
Space Group: P 6₅

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 126.764	α = 90
b = 126.764	β = 90
c = 61.407	γ = 120

Software Package:

Software Name	Purpose
PHASER	phasing
REFMAC	refinement
PDB_EXTRACT	data extraction
HKL-2000	data reduction

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2009-12-08

Deposition Author(s):

Suino-Powell, K.M.

Revision History (Full details and data files)

Version 1.0: 2009-12-08
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2024-02-21
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.