3GR8

Structure of OYE from Geobacillus kaustophilus, orthorhombic crystal form


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.213 
  • R-Value Work: 0.188 

Starting Model: experimental
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Ligand Structure Quality Assessment 


This is version 1.3 of the entry. See complete history


Literature

Old Yellow Enzyme-Catalyzed Dehydrogenation of Saturated Ketones

Schittmayer, M.Zach, S.Winkler, M.Winkler, A.Macheroux, P.Uhl, M.K.Gruber, K.Kambourakis, S.Rozzell, D.Glieder, A.

(2011) Adv Synth Catal 353: 268-274


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
NADPH dehydrogenase
A, B
340Geobacillus kaustophilusMutation(s): 0 
Gene Names: namA
EC: 1.6.99.1
UniProt
Find proteins for Q5KXG9 (Geobacillus kaustophilus (strain HTA426))
Explore Q5KXG9 
Go to UniProtKB:  Q5KXG9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5KXG9
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.213 
  • R-Value Work: 0.188 
  • Space Group: I 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 82.394α = 90
b = 151.93β = 90
c = 143.744γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
PDB_EXTRACTdata extraction
MAR345dtbdata collection
DENZOdata reduction
SCALAdata scaling
PHASERphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2010-03-31
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2014-09-03
    Changes: Database references
  • Version 1.3: 2023-11-01
    Changes: Data collection, Database references, Derived calculations, Refinement description