3ELI | pdb_00003eli

Crystal structure of the AHSA1 (SPO3351) protein from Silicibacter pomeroyi, Northeast Structural Genomics Consortium Target SiR160

PDB DOI: https://doi.org/10.2210/pdb3ELI/pdb

Classification: structural genomics, unknown function
Organism(s): Ruegeria pomeroyi
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2008-09-22 Released: 2008-09-30
Deposition Author(s): Forouhar, F., Su, M., Seetharaman, J., Janjua, H., Xiao, R., Ciccosanti, C., Foote, E.L., Wang, D., Tong, S., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.80 Å
R-Value Free:
0.265 (Depositor), 0.283 (DCC)
R-Value Work:
0.217 (Depositor), 0.233 (DCC)
R-Value Observed:
0.217 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Crystal structure of the AHSA1 (SPO3351) protein from Silicibacter pomeroyi, Northeast Structural Genomics Consortium Target SiR160

Forouhar, F., Su, M., Seetharaman, J., Janjua, H., Xiao, R., Ciccosanti, C., Foote, E.L., Wang, D., Tong, S., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L.

To be published.

Macromolecule Content

Total Structure Weight: 17.59 kDa
Atom Count: 1,166
Modeled Residue Count: 144
Deposited Residue Count: 152
Unique protein chains: 1

Macromolecules

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| 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Aha1 domain protein	A	152	Ruegeria pomeroyi	Mutation(s): 0 Gene Names: SPO3351
UniProt
Find proteins for Q5LN61 (Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)) Explore Q5LN61 Go to UniProtKB: Q5LN61
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q5LN61
Sequence Annotations Expand
Reference Sequence

Small Molecules

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.80 Å
R-Value Free: 0.265 (Depositor), 0.283 (DCC)
R-Value Work: 0.217 (Depositor), 0.233 (DCC)
R-Value Observed: 0.217 (Depositor)

Space Group: P 4₃ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 73.348	α = 90
b = 73.348	β = 90
c = 91.891	γ = 90

Software Package:

Software Name	Purpose
ADSC	data collection
SHELX	model building
CNS	refinement
HKL-2000	data reduction
SCALEPACK	data scaling
SHELX	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2008-09-30

Deposition Author(s):

Northeast Structural Genomics Consortium (NESG)

Revision History (Full details and data files)

Version 1.0: 2008-09-30
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2024-10-30
Changes: Data collection, Database references, Derived calculations, Structure summary