Structural Basis of the Enantioselective Decarboxylation by Arylmalonate Decarboxylase
Nakasako, M., Obata, R., Miyamoto, K., Ohta, H.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Arylmalonate decarboxylase | 240 | Bordetella bronchiseptica | Mutation(s): 0  EC: 4.1.1.76 | ![]() | |
UniProt | |||||
Find proteins for Q05115 (Bordetella bronchiseptica) Explore Q05115  Go to UniProtKB:  Q05115 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q05115 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | E [auth A], H [auth B], J [auth C], K [auth C], L [auth D] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | F [auth A], G [auth A], I [auth B], M [auth D] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
CME Query on CME | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O3 S2 | CYS |
Length ( Å ) | Angle ( ˚ ) |
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a = 83.508 | α = 90 |
b = 99.395 | β = 90 |
c = 139.981 | γ = 90 |
Software Name | Purpose |
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HKL-2000 | data collection |
MLPHARE | phasing |
REFMAC | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |