3E3P | pdb_00003e3p

Glycogen synthase kinase from Leishmania major

PDB DOI: https://doi.org/10.2210/pdb3E3P/pdb

Classification: TRANSFERASE
Organism(s): Leishmania major
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2008-08-07 Released: 2008-08-19
Deposition Author(s): Arakaki, T.L., Merritt, E.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free:
0.271 (Depositor), 0.272 (DCC)
R-Value Work:
0.224 (Depositor), 0.229 (DCC)
R-Value Observed:
0.226 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 3E3P

This is version 1.3 of the entry. See complete history.

Literature

Glycogen synthase kinase from Leishmania major

Arakaki, T.L., Merritt, E.A.

To be published.

Macromolecule Content

Total Structure Weight: 82.4 kDa
Atom Count: 5,610
Modeled Residue Count: 674
Deposited Residue Count: 720
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein kinase, putative Glycogen synthase kinase	A, B	360	Leishmania major	Mutation(s): 0 Gene Names: LmjF18.0270 EC: 2.7.1.37 (PDB Primary Data), 2.7.11.1 (UniProt)
UniProt
Find proteins for Q4QE15 (Leishmania major) Explore Q4QE15 Go to UniProtKB: Q4QE15
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q4QE15
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free: 0.271 (Depositor), 0.272 (DCC)
R-Value Work: 0.224 (Depositor), 0.229 (DCC)
R-Value Observed: 0.226 (Depositor)

Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 70.205	α = 90
b = 155.717	β = 90
c = 158.768	γ = 90

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
MOLREP	phasing
REFMAC	refinement
PDB_EXTRACT	data extraction

Structure Validation

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View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2008-08-19

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2008-08-19
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2017-10-25
Changes: Refinement description
Version 1.3: 2024-02-21
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.