Download MendeleyCrystal structure of mutant ABL kinase domain in complex with small molecule fragment
Bounaud, P.-Y., Gosberg, A., Hendle, J., Lewis, H.A., Romero, R., Wilson, M.E., Zhang, F.To be published.
3DK3
Crystal structure of mutant ABL kinase domain in complex with small molecule fragment
- PDB DOI: https://doi.org/10.2210/pdb3DK3/pdb
- Classification: TRANSFERASE
- Organism(s): Mus musculus
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2008-06-24 Released: 2008-07-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.02 Å
- R-Value Free: 0.248
- R-Value Work: 0.213
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Proto-oncogene tyrosine-protein kinase ABL1 | 293 | Mus musculus | Mutation(s): 2 Gene Names: Abl1, Abl EC: 2.7.10.2 |  | |
UniProt | |||||
Find proteins for P00520 (Mus musculus) Explore P00520 Go to UniProtKB: P00520 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P00520 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SX7 Query on SX7 | C [auth A], E [auth B] | 2-amino-5-[3-(1-ethyl-1H-pyrazol-5-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]-N,N-dimethylbenzamide C21 H22 N6 O INAGORZAOFUKOZ-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | D [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.02 Å
- R-Value Free: 0.248
- R-Value Work: 0.213
- Space Group: P 21 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 106.254 | α = 90 |
| b = 131.806 | β = 90 |
| c = 56.229 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SCALA | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
Entry History
Deposition Data
- Released Date: 2008-07-29 Deposition Author(s): Lewis, H.A.
Revision History (Full details and data files)
- Version 1.0: 2008-07-29
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2021-10-20
Changes: Database references, Derived calculations - Version 1.3: 2024-02-21
Changes: Data collection
