Download MendeleyCrystal Structure of RcdA yields insights into efficient CtrA proteolysis
Wilbur, J.D., Taylor, J.A., Kathleen, R.R.To be published.
3CTW
Crystal Structure of RcdA from Caulobacter crescentus CB15
- PDB DOI: https://doi.org/10.2210/pdb3CTW/pdb
- Classification: PROTEIN BINDING
- Organism(s): Caulobacter vibrioides
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2008-04-14 Released: 2009-07-14
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.90 Å
- R-Value Free: 0.312
- R-Value Work: 0.274
- R-Value Observed: 0.276
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| RcdA | A [auth B], B [auth D] | 169 | Caulobacter vibrioides | Mutation(s): 0 |  |
UniProt | |||||
Find proteins for Q9A3A9 (Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)) Explore Q9A3A9 Go to UniProtKB: Q9A3A9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9A3A9 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | C [auth B] D [auth B] E [auth B] F [auth B] G [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.90 Å
- R-Value Free: 0.312
- R-Value Work: 0.274
- R-Value Observed: 0.276
- Space Group: P 43
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 75.458 | α = 90 |
| b = 75.458 | β = 90 |
| c = 81.419 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| SHELX | phasing |
| SHELX | model building |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| SHELXD | phasing |
Entry History
Deposition Data
- Released Date: 2009-07-14 Deposition Author(s): Wilbur, J.D., Taylor, J.A., Kathleen, R.R.
Revision History (Full details and data files)
- Version 1.0: 2009-07-14
Type: Initial release - Version 1.1: 2011-07-13
Changes: Advisory, Version format compliance - Version 1.2: 2017-10-25
Changes: Refinement description - Version 1.3: 2018-06-06
Changes: Data collection, Refinement description, Source and taxonomy - Version 1.4: 2024-02-21
Changes: Data collection, Database references, Derived calculations
