3BRL | pdb_00003brl

Crystal Structure of LC8 S88E / Swa

PDB DOI: https://doi.org/10.2210/pdb3BRL/pdb

Classification: MOTOR PROTEIN
Organism(s): Drosophila melanogaster
Mutation(s): Yes

Deposited: 2007-12-21 Released: 2008-12-30
Deposition Author(s): Benison, G.C., Karplus, P.A., Barbar, E.J., Chiodo, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free:
0.254 (Depositor), 0.247 (DCC)
R-Value Work:
0.191 (Depositor), 0.191 (DCC)
R-Value Observed:
0.194 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 3BRL

This is version 1.3 of the entry. See complete history.

Literature

The Interplay of Ligand Binding and Phosphorylation in the Regulation of Dynein Light Chain LC8

Benison, G.C., Chiodo, M., Karplus, P.A., Barbar, E.J.

To be published.

Macromolecule Content

Total Structure Weight: 11.42 kDa
Atom Count: 880
Modeled Residue Count: 98
Deposited Residue Count: 99
Unique protein chains: 2

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Dynein light chain 1, cytoplasmic	A	89	Drosophila melanogaster	Mutation(s): 1
UniProt
Find proteins for Q24117 (Drosophila melanogaster) Explore Q24117 Go to UniProtKB: Q24117
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q24117
Sequence Annotations Expand
Reference Sequence

Find similar proteins by: Sequence | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein swallow 10-resiude peptide	B [auth C]	10	N/A	Mutation(s): 0
UniProt
Find proteins for P40688 (Drosophila melanogaster) Explore P40688 Go to UniProtKB: P40688
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P40688
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free: 0.254 (Depositor), 0.247 (DCC)
R-Value Work: 0.191 (Depositor), 0.191 (DCC)
R-Value Observed: 0.194 (Depositor)

Space Group: P 6₁ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 44.194	α = 90
b = 44.194	β = 90
c = 203.218	γ = 120

Software Package:

Software Name	Purpose
REFMAC	refinement
PDB_EXTRACT	data extraction

Structure Validation

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Entry History

Deposition Data

Released Date: 2008-12-30

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2008-12-30
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2021-10-20
Changes: Database references
Version 1.3: 2024-02-21
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.