Implication of Arg bindings on aromatic surfaces of lysozyme for additives that prevent protein aggregation
Ito, L., Shiraki, K., Matsuura, T., Yamaguchi, H.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Lysozyme C | 129 | Gallus gallus | Mutation(s): 0  EC: 3.2.1.17 | ||
UniProt | |||||
Find proteins for P00698 (Gallus gallus) Explore P00698  Go to UniProtKB:  P00698 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00698 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ARG Query on ARG | B [auth A], C [auth A], D [auth A], E [auth A] | ARGININE C6 H15 N4 O2 ODKSFYDXXFIFQN-BYPYZUCNSA-O | |||
ACT Query on ACT | J [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
CL Query on CL | F [auth A], G [auth A], H [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
NA Query on NA | I [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 78.357 | α = 90 |
b = 78.357 | β = 90 |
c = 37.312 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |