36RO | pdb_000036ro

Deposited: 2026-06-29 Released: 2026-08-05
Deposition Author(s): Fordjour, G.N.R., Armache, J.-P., Murakami, K.S.
Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Macromolecule Content

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA-directed RNA polymerase subunit Rpo1N	A	907	Pyrococcus furiosus DSM 3638	Mutation(s): 0 EC: 2.7.7.6
UniProt
Find proteins for Q8U0M4 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore Q8U0M4 Go to UniProtKB: Q8U0M4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8U0M4
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Reference Sequence

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Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA-directed RNA polymerase subunit beta	B	1,117	Pyrococcus furiosus DSM 3638	Mutation(s): 0 EC: 2.7.7.6
UniProt
Find proteins for Q8U0M3 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore Q8U0M3 Go to UniProtKB: Q8U0M3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8U0M3
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Reference Sequence

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Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA-directed RNA polymerase subunit Rpo1C	C	397	Pyrococcus furiosus DSM 3638	Mutation(s): 0 EC: 2.7.7.6
UniProt
Find proteins for Q8U0M5 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore Q8U0M5 Go to UniProtKB: Q8U0M5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8U0M5
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Reference Sequence

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Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA-directed RNA polymerase subunit Rpo3	D	275	Pyrococcus furiosus DSM 3638	Mutation(s): 0 EC: 2.7.7.6
UniProt
Find proteins for Q8U0E4 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore Q8U0E4 Go to UniProtKB: Q8U0E4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8U0E4
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Reference Sequence

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Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA-directed RNA polymerase subunit Rpo11	E [auth L]	95	Pyrococcus furiosus DSM 3638	Mutation(s): 0 EC: 2.7.7.6
UniProt
Find proteins for Q8U4N1 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore Q8U4N1 Go to UniProtKB: Q8U4N1
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8U4N1
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Reference Sequence

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Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA-directed RNA polymerase subunit Rpo5	F [auth H]	82	Pyrococcus furiosus DSM 3638	Mutation(s): 0 EC: 2.7.7.6
UniProt
Find proteins for Q8U0M2 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore Q8U0M2 Go to UniProtKB: Q8U0M2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8U0M2
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Reference Sequence

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Entity ID: 7
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA-directed RNA polymerase subunit Rpo10	G [auth N]	65	Pyrococcus furiosus DSM 3638	Mutation(s): 0 EC: 2.7.7.6
UniProt
Find proteins for P60292 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore P60292 Go to UniProtKB: P60292
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P60292
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Reference Sequence

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Entity ID: 8
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA-directed RNA polymerase subunit Rpo6	H [auth K]	57	Pyrococcus furiosus DSM 3638	Mutation(s): 0 EC: 2.7.7.6
UniProt
Find proteins for Q8U0E8 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore Q8U0E8 Go to UniProtKB: Q8U0E8
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8U0E8
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Reference Sequence

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Entity ID: 9
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA-directed RNA polymerase subunit Rpo12	I [auth P]	49	Pyrococcus furiosus DSM 3638	Mutation(s): 0 EC: 2.7.7.6
UniProt
Find proteins for Q8TZI3 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore Q8TZI3 Go to UniProtKB: Q8TZI3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8TZI3
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Reference Sequence

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download:Ideal Coordinates CCD File SDF format, chain J [auth A] SDF format, chain K [auth A] SDF format, chain L [auth B] SDF format, chain M [auth N] SDF format, chain N [auth P] MOL2 format, chain J [auth A] MOL2 format, chain K [auth A] MOL2 format, chain L [auth B] MOL2 format, chain M [auth N] MOL2 format, chain N [auth P] mmCIF format, chain J [auth A] mmCIF format, chain K [auth A] mmCIF format, chain L [auth B] mmCIF format, chain M [auth N] mmCIF format, chain N [auth P]	J [auth A], K [auth A], L [auth B], M [auth N], N [auth P]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain J [auth A] Focus chain K [auth A] Focus chain L [auth B] Focus chain M [auth N] Focus chain N [auth P] Interactions & Density Focus chain J [auth A] Focus chain K [auth A] Focus chain L [auth B] Focus chain M [auth N] Focus chain N [auth P]