2LM1 | pdb_00002lm1

Solution NMR Structure of Lysine-specific demethylase lid from Drosophila melanogaster, Northeast Structural Genomics Consortium Target FR824D

PDB DOI: https://doi.org/10.2210/pdb2LM1/pdb
BMRB: 18095

Classification: DNA BINDING PROTEIN
Organism(s): Drosophila melanogaster
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2011-11-18 Released: 2011-12-21
Deposition Author(s): Mills, J.L., Lee, D., Kohan, E., Sahdev, S., Acton, T.B., Xiao, R., Everett, J.K., Kusch, T., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG), Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2LM1

This is version 1.3 of the entry. See complete history.

Literature

Northeast Structural Genomics Consortium Target FR824D

Mills, J.L., Lee, D., Kohan, E., Sahdev, S., Acton, T.B., Xiao, R., Everett, J.K., Montelione, G.T., Szyperski, T.

To be published.

Macromolecule Content

Total Structure Weight: 12.49 kDa
Atom Count: 879
Modeled Residue Count: 107
Deposited Residue Count: 107
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Lysine-specific demethylase lid	A	107	Drosophila melanogaster	Mutation(s): 0 Gene Names: CG9088, lid EC: 1.14.11.67
UniProt
Find proteins for Q9VMJ7 (Drosophila melanogaster) Explore Q9VMJ7 Go to UniProtKB: Q9VMJ7
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9VMJ7
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2011-12-21

Deposition Author(s):

Montelione, G.T.

Northeast Structural Genomics Consortium (NESG)

Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)

Revision History (Full details and data files)

Version 1.0: 2011-12-21
Type: Initial release
Version 1.1: 2012-08-29
Changes: Structure summary
Version 1.2: 2023-06-14
Changes: Data collection, Database references, Other
Version 1.3: 2024-05-15
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.