2JSF | pdb_00002jsf

Solution structures of the envelope protein domain III from the dengue-2 virus

PDB DOI: https://doi.org/10.2210/pdb2JSF/pdb

Classification: VIRAL PROTEIN
Organism(s): dengue virus type 2
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2007-07-03 Released: 2008-05-13
Deposition Author(s): Huang, K., Cheng, J.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

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This is version 1.2 of the entry. See complete history.

Literature

Solution structure and neutralizing antibody binding studies of domain III of the dengue-2 virus envelope protein.

Huang, K.C., Lee, M.C., Wu, C.W., Huang, K.J., Lei, H.Y., Cheng, J.W.

(2008) Proteins 70: 1116-1119

PubMed: 18004779 Search on PubMed
DOI: https://doi.org/10.1002/prot.21806
Primary Citation Related Structures:
2JSF

Organizational Affiliation

Institute of Biotechnology and Department of Life Science, National Tsing Hua University, Hsinchu 300, Taiwan.

Macromolecule Content

Total Structure Weight: 13.28 kDa
Atom Count: 932
Modeled Residue Count: 117
Deposited Residue Count: 117
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
domain III of ENVELOPE PROTEIN E	A	117	dengue virus type 2	Mutation(s): 0
UniProt
Find proteins for P18356 (Dengue virus type 2 (strain Thailand/PUO-218/1980)) Explore P18356 Go to UniProtKB: P18356
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P18356
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2008-05-13

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2008-05-13
Type: Initial release
Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance
Version 1.2: 2024-11-06
Changes: Data collection, Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.