2FBI | pdb_00002fbi

The crystal structure of transcriptional regulator PA4135

PDB DOI: https://doi.org/10.2210/pdb2FBI/pdb

Classification: TRANSCRIPTION
Organism(s): Pseudomonas aeruginosa
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2005-12-09 Released: 2005-12-20
Deposition Author(s): Lunin, V.V., Evdokimova, E., Kudritska, M., Cuff, M.E., Joachimiak, A., Edwards, A.M., Savchenko, A., Midwest Center for Structural Genomics (MCSG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.10 Å
R-Value Free:
0.276 (Depositor), 0.269 (DCC)
R-Value Work:
0.223 (Depositor), 0.219 (DCC)
R-Value Observed:
0.225 (Depositor)

wwPDB Validation 3D Report Full Report

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This is version 1.4 of the entry. See complete history.

Literature

The crystal structure of transcriptional regulator PA4135

Lunin, V.V., Evdokimova, E., Kudritska, M., Cuff, M.E., Joachimiak, A., Edwards, A.M., Savchenko, A.

To be published.

Macromolecule Content

Total Structure Weight: 16.61 kDa
Atom Count: 1,285
Modeled Residue Count: 136
Deposited Residue Count: 142
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
probable transcriptional regulator	A	142	Pseudomonas aeruginosa	Mutation(s): 0
UniProt
Find proteins for Q9HWP6 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9HWP6 Go to UniProtKB: Q9HWP6
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9HWP6
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.10 Å
R-Value Free: 0.276 (Depositor), 0.269 (DCC)
R-Value Work: 0.223 (Depositor), 0.219 (DCC)
R-Value Observed: 0.225 (Depositor)

Space Group: P 6₅ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 84.782	α = 90
b = 84.782	β = 90
c = 91.683	γ = 120

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-2000	data reduction
SCALEPACK	data scaling
SnB	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2005-12-20

Deposition Author(s):

Midwest Center for Structural Genomics (MCSG)

Revision History (Full details and data files)

Version 1.0: 2005-12-20
Type: Initial release
Version 1.1: 2008-05-01
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance
Version 1.3: 2017-10-18
Changes: Refinement description
Version 1.4: 2024-02-14
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.