2YRL | pdb_00002yrl

Solution structure of the PKD domain from KIAA 1837 protein

PDB DOI: https://doi.org/10.2210/pdb2YRL/pdb
BMRB: 11231

Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2007-04-02 Released: 2007-10-02
Deposition Author(s): Qin, X.R., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function

wwPDB Validation 3D Report Full Report

Validation slider image for 2YRL

This is version 1.3 of the entry. See complete history.

Literature

Solution structure of the PKD domain from KIAA 1837 protein

Qin, X.R., Hayashi, F., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 10.59 kDa
Atom Count: 742
Modeled Residue Count: 102
Deposited Residue Count: 102
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
KIAA1837 protein	A	102	Homo sapiens	Mutation(s): 0 Gene Names: KIAA1837
UniProt & NIH Common Fund Data Resources
Find proteins for Q8IZA0 (Homo sapiens) Explore Q8IZA0 Go to UniProtKB: Q8IZA0
PHAROS: Q8IZA0 GTEx: ENSG00000142687
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8IZA0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2007-10-02

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2007-10-02
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2022-03-16
Changes: Data collection, Database references, Derived calculations
Version 1.3: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.