2YJR | pdb_00002yjr

Structure of F1174L Mutant Anaplastic Lymphoma Kinase

PDB DOI: https://doi.org/10.2210/pdb2YJR/pdb

Classification: TRANSFERASE
Organism(s): Homo sapiens
Expression System: Spodoptera frugiperda
Mutation(s): Yes

Deposited: 2011-05-23 Released: 2012-06-06
Deposition Author(s): McTigue, M., Deng, Y., Liu, W., Brooun, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free:
0.281 (Depositor), 0.283 (DCC)
R-Value Work:
0.221 (Depositor)
R-Value Observed:
0.221 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

Validation slider image for 2YJR

This is version 1.2 of the entry. See complete history.

Literature

Structure of F1174L Mutant Anaplastic Lymphoma Kinase

Mctigue, M., Deng, Y., Liu, W., Brooun, A.

To be published.

Macromolecule Content

Total Structure Weight: 38.56 kDa
Atom Count: 2,422
Modeled Residue Count: 281
Deposited Residue Count: 342
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
ALK TYROSINE KINASE RECEPTOR	A	342	Homo sapiens	Mutation(s): 1 EC: 2.7.10.1
UniProt & NIH Common Fund Data Resources
Find proteins for Q9UM73 (Homo sapiens) Explore Q9UM73 Go to UniProtKB: Q9UM73
PHAROS: Q9UM73 GTEx: ENSG00000171094
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9UM73
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free: 0.281 (Depositor), 0.283 (DCC)
R-Value Work: 0.221 (Depositor)
R-Value Observed: 0.221 (Depositor)

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 51.439	α = 90
b = 56.906	β = 90
c = 102.201	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
XDS	data reduction
SCALEPACK	data scaling
CNX	phasing

Structure Validation

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View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2012-06-06

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2012-06-06
Type: Initial release
Version 1.1: 2019-05-08
Changes: Data collection, Experimental preparation, Other
Version 1.2: 2023-12-20
Changes: Data collection, Database references, Other, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.