The Crystal Structure of Putative Transcriptional Regulator LysR From Vibrio parahaemolyticus.
Wu, R., Abdullah, J., Binkowski, T.A., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Putative transcriptional regulator, LysR family | 218 | Vibrio parahaemolyticus RIMD 2210633 | Mutation(s): 0  Gene Names: VP0635 | ![]() | |
UniProt | |||||
Find proteins for Q87RY9 (Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)) Explore Q87RY9  Go to UniProtKB:  Q87RY9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q87RY9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | C [auth A], D [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 47.291 | α = 90 |
b = 83.11 | β = 90 |
c = 95.509 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
SBC-Collect | data collection |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
MLPHARE | phasing |