The crystal structure of the protein of uncharacterized function, DUF402 from Rhodococcus sp. RHA1
Kim, Y., Evdokimova, E., Kudritska, M., Edwards, A., Savchenko, A., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Hypothetical protein DUF402 | 176 | Rhodococcus jostii RHA1 | Mutation(s): 4  Gene Names: RHA1_ro00977 | ||
UniProt | |||||
Find proteins for Q0SI31 (Rhodococcus jostii (strain RHA1)) Explore Q0SI31  Go to UniProtKB:  Q0SI31 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q0SI31 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | D [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
ACY Query on ACY | C [auth A], E [auth B] | ACETIC ACID C2 H4 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 132.203 | α = 90 |
b = 38.98 | β = 107.69 |
c = 70.721 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
SBC-Collect | data collection |
HKL-3000 | data collection |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
HKL-3000 | phasing |
SHELXCD | phasing |
SHELXD | phasing |
MLPHARE | phasing |
RESOLVE | phasing |
ARP/wARP | model building |