2OII | pdb_00002oii

Structure of EMILIN-1 C1q-like domain

PDB DOI: https://doi.org/10.2210/pdb2OII/pdb
BMRB: 5882

Classification: STRUCTURAL PROTEIN
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2007-01-11 Released: 2008-01-22
Deposition Author(s): Verdone, G., Colebrooke, S.A., Corazza, A., Cicero, D.O., Eliseo, T., Viglino, P., Campbell, I.D., Colombatti, A., Esposito, G.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2OII

This is version 1.3 of the entry. See complete history.

Literature

The solution structure of the C-terminal domain of EMILIN-1

Verdone, G., Colebrooke, S.A., Corazza, A., Cicero, D.O., Eliseo, T., Viglino, P., Campbell, I.D., Colombatti, A., Esposito, G.

To be published.

Macromolecule Content

Total Structure Weight: 51.68 kDa
Atom Count: 2,916
Modeled Residue Count: 393
Deposited Residue Count: 486
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
EMILIN-1	A, B, C	162	Homo sapiens	Mutation(s): 0 Gene Names: EMILIN1, EMI
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Y6C2 (Homo sapiens) Explore Q9Y6C2 Go to UniProtKB: Q9Y6C2
PHAROS: Q9Y6C2 GTEx: ENSG00000138080
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9Y6C2
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

Structure Validation

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View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2008-01-22

Deposition Author(s):

Colebrooke, S.A.

Revision History (Full details and data files)

Version 1.0: 2008-01-22
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2022-03-16
Changes: Data collection, Database references, Derived calculations
Version 1.3: 2023-12-27
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.