Crystal structure of Yeast Cytosine Deaminase D92E Triple Mutant bound to transition state analogue HPY
Stolworthy, T., Korkegian, A.M., Willmon, C., Stoddard, B.L., Black, M.E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytosine deaminase | 161 | Saccharomyces cerevisiae | Mutation(s): 4  Gene Names: FCY1 EC: 3.5.4.1 | ![]() | |
UniProt | |||||
Find proteins for Q12178 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore Q12178  Go to UniProtKB:  Q12178 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q12178 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HPY Query on HPY | D [auth A], G [auth B] | 4-HYDROXY-3,4-DIHYDRO-1H-PYRIMIDIN-2-ONE C4 H6 N2 O2 DEAAWXYGBWCVJW-VKHMYHEASA-N | |||
ZN Query on ZN | C [auth A], E [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
CA Query on CA | F [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 55.916 | α = 90 |
b = 69.09 | β = 90 |
c = 74.174 | γ = 90 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
EPMR | phasing |
CNS | refinement |
PDB_EXTRACT | data extraction |
ADSC | data collection |