2MDK | pdb_00002mdk

NMR Solution Structure of MSP-P56S Domain/VAPB in DPC

• PDB DOI: https://doi.org/10.2210/pdb2MDK/pdb
• BMRB: 19489

• Classification: MEMBRANE PROTEIN
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2013-09-11 Released: 2013-10-30 
• Deposition Author(s): Qin, H., Lim, L., Song, J.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 10 
• Selection Criteria: structures with the lowest energy 

Literature

MSP-P56S Domain, VAPB in DPC

Qin, H., Lim, L., Song, J.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 14.21 kDa 
• Atom Count: 992 
• Modeled Residue Count: 125 
• Deposited Residue Count: 125 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Vesicle-associated membrane protein-associated protein B/C	A	125	Homo sapiens	Mutation(s): 1  Gene Names: VAPB
UniProt & NIH Common Fund Data Resources
Find proteins for O95292 (Homo sapiens) Explore O95292  Go to UniProtKB:  O95292
PHAROS:  O95292 GTEx:  ENSG00000124164

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 10 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2013-10-30 
Deposition Author(s): Qin, H., Lim, L., Song, J.

Revision History  

• Version 1.0: 2013-10-30
  Type: Initial release
  
• Version 1.1: 2024-05-01
  Changes: Data collection, Database references