2M3N | pdb_00002m3n

Peptide leucine arginine


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation 3D Report Full Report

Validation slider image for 2M3N

This is version 1.3 of the entry. See complete history

Literature

Therapeutic potential of the Peptide leucine arginine as a new nonplant bowman-birk-like serine protease inhibitor.

Rothemund, S.Sonnichsen, F.D.Polte, T.

(2013) J Med Chem 56: 6732-6744

  • DOI: https://doi.org/10.1021/jm4005362
  • Primary Citation Related Structures: 
    2M3N

  • PubMed Abstract: 

    The peptide leucine arginine (pLR) belongs to a new class of cyclic peptides isolated from frog skin. Its primary sequence is similar to the reactive loop of plant Bowman-Birk inhibitors (BBI), and the recently discovered circular sunflower trypsin inhibitor-1 (SFTI-1). The conformational properties of pLR in solution were determined by NMR spectroscopy and revealed excellent structural similarity to BBI and SFTI-1. Moreover, pLR is a highly potent trypsin inhibitor, with Ki values in the nanomolar range, and, due to its small size, a potential inhibitor of the serine protease tryptase. Since tryptase plays a crucial role in the development of allergic airway inflammation, the therapeutic potential of pLR in a murine asthma model was investigated. Treatment of ovalbumin-sensitized mice with pLR during allergen challenge reduced the acute asthma phenotype. Most importantly, application even at the end of a long-lasting chronic asthma model decreased the development of chronic airway inflammation and tissue remodeling.


  • Organizational Affiliation
    • Interdisciplinary Center of Clinical Research, University of Leipzig , Leipzig, Germany.

Macromolecule Content 

  • Total Structure Weight: 2.14 kDa 
  • Atom Count: 150 
  • Modeled Residue Count: 18 
  • Deposited Residue Count: 18 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:  Sequence   |   3D Structure  
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Peptide leucine arginine18Lithobates pipiensMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q90WP7 (Lithobates pipiens)
Explore Q90WP7 
Go to UniProtKB:  Q90WP7
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ90WP7
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

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Entry History 

Deposition Data

  • Released Date: 2013-09-11 
  • Deposition Author(s): Polte, T.

Revision History  (Full details and data files)

  • Version 1.0: 2013-09-11
    Type: Initial release
  • Version 1.1: 2013-09-25
    Changes: Database references
  • Version 1.2: 2023-06-14
    Changes: Data collection, Database references, Other
  • Version 1.3: 2024-10-30
    Changes: Data collection, Database references, Structure summary