2M0D | pdb_00002m0d

Solution Structure of Miz-1 zinc finger 5

PDB DOI: https://doi.org/10.2210/pdb2M0D/pdb
BMRB: 18806

Classification: TRANSCRIPTION
Organism(s): Homo sapiens
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2012-10-24 Released: 2012-11-14
Deposition Author(s): Bernard, D., Bedard, M., Bilodeau, J., Lavigne, P.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 300
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2M0D

This is version 1.3 of the entry. See complete history.

Literature

NMR Structure Note: Structure of Miz-1 Zinc Fingers 5 to 7

Bernard, D., Bedard, M., Bilodeau, J., Lavigne, P.

To be published.

Macromolecule Content

Total Structure Weight: 13.03 kDa
Atom Count: 248
Modeled Residue Count: 30
Deposited Residue Count: 112
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Zinc finger and BTB domain-containing protein 17	A	112	Homo sapiens	Mutation(s): 0 Gene Names: MIZ1, ZBTB17, ZNF151, ZNF60
UniProt & NIH Common Fund Data Resources
Find proteins for Q13105 (Homo sapiens) Explore Q13105 Go to UniProtKB: Q13105
PHAROS: Q13105 GTEx: ENSG00000116809
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q13105
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download:Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A] mmCIF format, chain B [auth A]	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain B [auth A]

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 300
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

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View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2012-11-14

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2012-11-14
Type: Initial release
Version 1.1: 2016-04-27
Changes: Structure summary
Version 1.2: 2023-06-14
Changes: Data collection, Database references, Derived calculations, Other
Version 1.3: 2024-05-15
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.