2LS1 | pdb_00002ls1

Structure of Sviceucin, an antibacterial type I lasso peptide from Streptomyces sviceus

PDB DOI: https://doi.org/10.2210/pdb2LS1/pdb
BMRB: 18405

Classification: ANTIMICROBIAL PROTEIN
Organism(s): Streptomyces sviceus ATCC 29083
Expression System: Streptomyces coelicolor
Mutation(s): No

Deposited: 2012-04-18 Released: 2012-08-15
Deposition Author(s): Li, Y., Ducasse, R., Blond, A., Zirah, S., Goulard, C., Lescop, E., Guittet, E., Pernodet, J., Rebuffat, S.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 1
Conformers Submitted: 20
Selection Criteria: all calculated structures submitted

wwPDB Validation 3D Report Full Report

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This is version 1.2 of the entry. See complete history.

Literature

Structure and biosynthesis of Sviceucin, an antibacterial type I lasso peptide from Streptomyces sviceus

Li, Y., Ducasse, R., Blond, A., Zirah, S., Goulard, C., Lescop, E., Guittet, E., Pernodet, J., Rebuffat, S.

To be published.

Macromolecule Content

Total Structure Weight: 2.11 kDa
Atom Count: 144
Modeled Residue Count: 20
Deposited Residue Count: 20
Unique protein chains: 1

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein	A	20	Streptomyces sviceus ATCC 29083	Mutation(s): 0 Gene Names: SSEG_05172
UniProt
Find proteins for B5I0A0 (Streptomyces sviceus (strain ATCC 29083 / DSM 924 / JCM 4929 / NBRC 13980 / NCIMB 11184 / NRRL 5439 / UC 5370)) Explore B5I0A0 Go to UniProtKB: B5I0A0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	B5I0A0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 1
Conformers Submitted: 20
Selection Criteria: all calculated structures submitted

Structure Validation

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Entry History

Deposition Data

Released Date: 2012-08-15

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2012-08-15
Type: Initial release
Version 1.1: 2023-06-14
Changes: Data collection, Database references, Derived calculations, Other
Version 1.2: 2024-10-16
Changes: Data collection, Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.