2LE9 | pdb_00002le9

RAGEC2-S100A13 tetrameric complex

PDB DOI: https://doi.org/10.2210/pdb2LE9/pdb
BMRB: 17704

Classification: MEMBRANE PROTEIN/METAL BINDING PROTEIN
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2011-06-14 Released: 2012-06-27
Deposition Author(s): Rani, S.G., Mohan, S.K., Yu, C.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 4000
Conformers Submitted: 1
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2LE9

This is version 1.2 of the entry. See complete history.

Literature

Interaction of S100A13 with Receptor for Advanced Glycation End products (RAGE) C2 domain

Rani, S.G., Mohan, S.K., Yu, C.

To be published.

Macromolecule Content

Total Structure Weight: 42.01 kDa
Atom Count: 2,952
Modeled Residue Count: 380
Deposited Residue Count: 380
Unique protein chains: 2

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Advanced glycosylation end product-specific receptor	A, D	93	Homo sapiens	Mutation(s): 0 Gene Names: AGER, RAGE, RAGEC2
UniProt & NIH Common Fund Data Resources
Find proteins for Q15109 (Homo sapiens) Explore Q15109 Go to UniProtKB: Q15109
PHAROS: Q15109 GTEx: ENSG00000204305
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q15109
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein S100-A13	B, C	97	Homo sapiens	Mutation(s): 0 Gene Names: S100A13
UniProt & NIH Common Fund Data Resources
Find proteins for Q99584 (Homo sapiens) Explore Q99584 Go to UniProtKB: Q99584
GTEx: ENSG00000189171
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q99584
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 4000
Conformers Submitted: 1
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2012-06-27

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2012-06-27
Type: Initial release
Version 1.1: 2023-06-14
Changes: Data collection, Database references, Other
Version 1.2: 2024-10-09
Changes: Data collection, Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.