2L5L | pdb_00002l5l

Solution Structure of Thioredoxin from Bacteroides Vulgatus

PDB DOI: https://doi.org/10.2210/pdb2L5L/pdb
BMRB: 17275

Classification: TRANSPORT PROTEIN
Organism(s): Phocaeicola vulgatus ATCC 8482
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2010-11-02 Released: 2010-11-24
Deposition Author(s): Harris, R., Foti, R., Seidel, R.D., Bonanno, J.B., Freeman, J., Bain, K.T., Sauder, J.M., Burley, S.K., Girvin, M.E., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC), New York Structural Genomics Research Consortium (NYSGRC)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: 20 structures for lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 2L5L

This is version 1.5 of the entry. See complete history.

Literature

Solution Structure of Thioredoxin from Bacteroides Vulgatus

Harris, R., Foti, R., Seidel, R.D., Bonanno, J.B., Freeman, J., Bain, K.T., Sauder, J.M., Burley, S.K., Girvin, M.E., Almo, S.C.

To be published.

Macromolecule Content

Total Structure Weight: 15.43 kDa
Atom Count: 1,085
Modeled Residue Count: 136
Deposited Residue Count: 136
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Thioredoxin	A	136	Phocaeicola vulgatus ATCC 8482	Mutation(s): 0 Gene Names: BVU_1309
UniProt
Find proteins for A6KZY4 (Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154)) Explore A6KZY4 Go to UniProtKB: A6KZY4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A6KZY4
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: 20 structures for lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2010-11-24

Deposition Author(s):

New York SGX Research Center for Structural Genomics (NYSGXRC)

New York Structural Genomics Research Consortium (NYSGRC)

Revision History (Full details and data files)

Version 1.0: 2010-11-24
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2013-05-08
Changes: Structure summary
Version 1.3: 2018-11-14
Changes: Data collection, Structure summary
Version 1.4: 2021-02-10
Changes: Database references, Structure summary
Version 1.5: 2024-05-01
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.