2KUS | pdb_00002kus

Spatial structure of Antimicrobial Peptide Sm-AMP-1.1a

PDB DOI: https://doi.org/10.2210/pdb2KUS/pdb
BMRB: 16745

Classification: ANTIMICROBIAL PROTEIN
Organism(s): Stellaria media
Mutation(s): No
Membrane Protein: Yes OPM

Deposited: 2010-02-27 Released: 2011-03-02
Deposition Author(s): Bozin, T.N., Bocharov, E.V., Sobol, V.A., Vassilevski, A.A., Arseniev, A.A.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function

wwPDB Validation 3D Report Full Report

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This is version 1.4 of the entry. See complete history.

Literature

Common chickweed (Stellaria media) antifungal peptides with chitin-binding domain provide unique plant defense strategy

Vassilevski, A.A., Musolyamov, A., Nikonorova, A., Finkina, E., Slavokhotova, A., Shagin, D., Bozin, T.N., Bocharov, E.V., Ovchinnikova, T., Arseniev, A.A., Babakov, A., Lukyanov, S., Grishin, E., Egorov, T.

To be published.

Macromolecule Content

Total Structure Weight: 3.47 kDa
Atom Count: 238
Modeled Residue Count: 35
Deposited Residue Count: 35
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Sm-AMP-1.1a	A	35	Stellaria media	Mutation(s): 0 Membrane Entity: Yes
UniProt
Find proteins for E1UYT9 (Stellaria media) Explore E1UYT9 Go to UniProtKB: E1UYT9
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	E1UYT9
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function

Structure Validation

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Entry History

Deposition Data

Released Date: 2011-03-02

Deposition Author(s):

Vassilevski, A.A.

Revision History (Full details and data files)

Version 1.0: 2011-03-02
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2020-02-26
Changes: Data collection, Database references, Other
Version 1.3: 2023-06-14
Changes: Database references, Other
Version 1.4: 2024-10-30
Changes: Data collection, Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.