2K3Z | pdb_00002k3z

NMR structure of adenosine bulged RNA duplex with C:G-A triple

Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 50 
  • Conformers Submitted: 10 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation 3D Report Full Report

Validation slider image for 2K3Z

This is version 1.3 of the entry. See complete history. 

Literature

Structure and dynamics of adenosine bulged RNA duplex reveals formation of the dinucleotide platform in the C:G-A triple

Popenda, L., Bielecki, L., Gdaniec, Z., Adamiak, R.W.

(2008) ARKIVOC 2009: 130-144

Macromolecule Content 

  • Total Structure Weight: 5.41 kDa 
  • Atom Count: 358 
  • Modeled Residue Count: 17 
  • Deposited Residue Count: 17 
  • Unique nucleic acid chains: 2

Macromolecules

Find similar nucleic acids by:  Sequence
Entity ID: 1
MoleculeChains LengthOrganismImage
RNA_(5'-R(*GP*UP*CP*GP*AP*GP*CP*UP*G)-3')_9N/A
Sequence Annotations
Expand
Reference Sequence
Find similar nucleic acids by:  Sequence
Entity ID: 2
MoleculeChains LengthOrganismImage
RNA_(5'-R(*CP*AP*GP*CP*CP*GP*AP*C)-3')_8N/A
Sequence Annotations
Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 50 
  • Conformers Submitted: 10 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



View more in-depth experimental data

Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2008-11-04
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2022-03-16
    Changes: Data collection, Database references, Derived calculations
  • Version 1.3: 2024-05-29
    Changes: Data collection