2J04 | pdb_00002j04

The tau60-tau91 subcomplex of yeast transcription factor IIIC


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.20 Å
  • R-Value Free: 
    0.257 (Depositor), 0.258 (DCC) 
  • R-Value Work: 
    0.212 (Depositor) 
  • R-Value Observed: 
    0.214 (Depositor) 

wwPDB Validation 3D Report Full Report

Validation slider image for 2J04

This is version 1.3 of the entry. See complete history

Literature

Structure of the Tau60/Deltatau91 Subcomplex of Yeast Transcription Factor Iiic: Insights Into Preinitiation Complex Assembly

Mylona, A.Fernandez-Tornero, C.Legrand, P.Haupt, M.Sentenac, A.Acker, J.Muller, C.W.

(2006) Mol Cell 24: 221

  • DOI: https://doi.org/10.1016/j.molcel.2006.08.013
  • Primary Citation Related Structures: 
    2J04

  • PubMed Abstract: 

    Yeast RNA polymerase III is recruited upon binding of subcomplexes tauA and tauB of transcription factor IIIC (TFIIIC) to the A and B blocks of tRNA gene promoters. The tauB subcomplex consists of subunits tau60, tau91, and tau138. We determined the 3.2 A crystal structure of tau60 bound to a large C-terminal fragment of tau91 (Deltatau91). Deltatau91 protein contains a seven-bladed propeller preceded by an N-terminal extension, whereas tau60 contains a structurally homologous propeller followed by a C-terminal domain with a novel alpha/beta fold. The two propeller domains do not have any detectable DNA binding activity and mediate heterodimer formation that may serve as scaffold for tau138 assembly. We show that the C-terminal tau60 domain interacts with the TATA binding protein (TBP). Recombinant tauB recruits TBP and stimulates TFIIIB-directed transcription on a TATA box containing tRNA gene, implying a combined contribution of tauA and tauB to preinitiation complex formation.


  • Organizational Affiliation
    • European Molecular Biology Laboratory, Grenoble Outstation, B.P. 181, 38042 Grenoble Cedex 9, France.

Macromolecule Content 

  • Total Structure Weight: 253.37 kDa 
  • Atom Count: 16,935 
  • Modeled Residue Count: 2,114 
  • Deposited Residue Count: 2,224 
  • Unique protein chains: 2

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
HYPOTHETICAL PROTEIN YPL007C
A, C
588Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for Q12308 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore Q12308 
Go to UniProtKB:  Q12308
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ12308
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
YDR362CP
B, D
524Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for Q06339 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore Q06339 
Go to UniProtKB:  Q06339
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ06339
Sequence Annotations
Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.20 Å
  • R-Value Free:  0.257 (Depositor), 0.258 (DCC) 
  • R-Value Work:  0.212 (Depositor) 
  • R-Value Observed: 0.214 (Depositor) 
Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 61.42α = 90
b = 125.8β = 94.49
c = 210.47γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
SHARPphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2006-10-23
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Advisory, Refinement description, Version format compliance
  • Version 1.2: 2019-04-03
    Changes: Data collection, Other, Source and taxonomy
  • Version 1.3: 2024-11-06
    Changes: Data collection, Database references, Other, Structure summary