Crystal Structure of the Putative TetR-family Transcriptional Regulator from Rhodococcus sp. RHA1
Kim, Y., Joachimiak, A., Skarina, T., Zheng, H., Edwards, A., Savchenko, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Putative TetR-family transcriptional regulator | 214 | Rhodococcus jostii RHA1 | Mutation(s): 0  Gene Names: rha6424 | ![]() | |
UniProt | |||||
Find proteins for Q0S8Y3 (Rhodococcus jostii (strain RHA1)) Explore Q0S8Y3  Go to UniProtKB:  Q0S8Y3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q0S8Y3 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EDO Query on EDO | E [auth A], F [auth A], H [auth B], I [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
MG Query on MG | C [auth A], D [auth A], G [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 42.259 | α = 90 |
b = 72.13 | β = 90 |
c = 133.875 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
SBC-Collect | data collection |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
HKL-3000 | phasing |
MLPHARE | phasing |
RESOLVE | phasing |
SHELXE | model building |
SHELXD | phasing |