2GNX | pdb_00002gnx

X-ray structure of a hypothetical protein from Mouse Mm.209172

• PDB DOI: https://doi.org/10.2210/pdb2GNX/pdb

• Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
• Organism(s): Mus musculus
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2006-04-11 Released: 2006-05-02 
• Deposition Author(s): Phillips Jr., G.N., McCoy, J.G., Bitto, E., Wesenberg, G.E., Bingman, C.A., Center for Eukaryotic Structural Genomics (CESG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.45 Å
• R-Value Free: 
  0.322 (Depositor), 0.330 (DCC) 
• R-Value Work: 
  0.281 (Depositor), 0.296 (DCC) 

Literature

X-ray structure of a hypothetical protein from Mouse Mm.209172

Phillips Jr., G.N., McCoy, J.G., Bitto, E., Wesenberg, G.E., Bingman, C.A., Center for Eukaryotic Structural Genomics (CESG)

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 39.35 kDa 
• Atom Count: 2,315 
• Modeled Residue Count: 288 
• Deposited Residue Count: 344 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
hypothetical protein	A	344	Mus musculus	Mutation(s): 8  Gene Names: Mm209172, BC065058
UniProt & NIH Common Fund Data Resources
Find proteins for Q6P1I3 (Mus musculus) Explore Q6P1I3  Go to UniProtKB:  Q6P1I3
IMPC:  MGI:2670984

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET
UNK	A	L-PEPTIDE LINKING	C4 H9 N O2		--

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.45 Å
• R-Value Free:  0.322 (Depositor), 0.330 (DCC) 
• R-Value Work:  0.281 (Depositor), 0.296 (DCC) 

Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 82.687	α = 90
b = 198.962	β = 90
c = 67.076	γ = 90

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
SHARP	phasing
DM	phasing
CNS	refinement
PDB_EXTRACT	data extraction

Structure Validation

Entry History 

Deposition Data

• Released Date: 2006-05-02 
Deposition Author(s): Phillips Jr., G.N., McCoy, J.G., Bitto, E., Wesenberg, G.E., Bingman, C.A., Center for Eukaryotic Structural Genomics (CESG)

Revision History  

• Version 1.0: 2006-05-02
  Type: Initial release
  
• Version 1.1: 2008-05-01
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2017-10-18
  Changes: Refinement description
• Version 1.4: 2024-10-16
  Changes: Data collection, Database references, Derived calculations, Structure summary