2EHW | pdb_00002ehw

Conserved hypothetical proteim (TTHB059) from Thermo thermophilus HB8

PDB DOI: https://doi.org/10.2210/pdb2EHW/pdb

Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Organism(s): Thermus thermophilus HB8
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2007-03-09 Released: 2007-09-11
Deposition Author(s): Rehse, P.H., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.22 Å
R-Value Free:
0.284 (Depositor)
R-Value Work:
0.220 (Depositor), 0.239 (DCC)

wwPDB Validation 3D Report Full Report

Validation slider image for 2EHW

This is version 1.2 of the entry. See complete history.

Literature

Conserved hypothetical proteim (TTHB059) from Thermo thermophilus HB8

Rehse, P.H., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 55.59 kDa
Atom Count: 3,867
Modeled Residue Count: 463
Deposited Residue Count: 480
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Hypothetical protein TTHB059	A, B, C, D	120	Thermus thermophilus HB8	Mutation(s): 0
UniProt
Find proteins for Q53WA3 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q53WA3 Go to UniProtKB: Q53WA3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q53WA3
Sequence Annotations Expand
Reference Sequence

Small Molecules

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A, B, C, D	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.22 Å
R-Value Free: 0.284 (Depositor)
R-Value Work: 0.220 (Depositor), 0.239 (DCC)

Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 58.45	α = 90
b = 132.46	β = 90
c = 117.77	γ = 90

Software Package:

Software Name	Purpose
d*TREK	data scaling
SOLVE	phasing
RESOLVE	phasing
CNS	refinement
PDB_EXTRACT	data extraction
ADSC	data collection
d*TREK	data reduction

Structure Validation

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Entry History

Deposition Data

Released Date: 2007-09-11

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2007-09-11
Type: Initial release
Version 1.1: 2011-07-13
Changes: Derived calculations, Source and taxonomy, Version format compliance
Version 1.2: 2024-10-23
Changes: Data collection, Database references, Derived calculations, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.