2DYL | pdb_00002dyl

Crystal structure of human mitogen-activated protein kinase kinase 7 activated mutant (S287D, T291D)

PDB DOI: https://doi.org/10.2210/pdb2DYL/pdb

Classification: TRANSFERASE
Organism(s): Homo sapiens
Mutation(s): Yes

Deposited: 2006-09-15 Released: 2007-08-28
Deposition Author(s): Kukimoto-Niino, M., Takagi, T., Kaminishi, T., Uchikubo-Kamo, T., Terada, T., Matsuzaki, O., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.45 Å
R-Value Free:
0.283 (Depositor), 0.279 (DCC)
R-Value Work:
0.217 (Depositor), 0.217 (DCC)
R-Value Observed:
0.217 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.3 of the entry. See complete history.

Literature

Crystal structure of human mitogen-activated protein kinase kinase 7 activated mutant (S287D, T291D)

Kukimoto-Niino, M., Takagi, T., Kaminishi, T., Uchikubo-Kamo, T., Terada, T., Matsuzaki, O., Shirouzu, M., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 35.76 kDa
Atom Count: 2,233
Modeled Residue Count: 272
Deposited Residue Count: 318
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Dual specificity mitogen-activated protein kinase kinase 7	A	318	Homo sapiens	Mutation(s): 2 EC: 2.7.12.2
UniProt & NIH Common Fund Data Resources
Find proteins for O14733 (Homo sapiens) Explore O14733 Go to UniProtKB: O14733
PHAROS: O14733 GTEx: ENSG00000076984
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	O14733
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.45 Å
R-Value Free: 0.283 (Depositor), 0.279 (DCC)
R-Value Work: 0.217 (Depositor), 0.217 (DCC)
R-Value Observed: 0.217 (Depositor)

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 61.552	α = 90
b = 69.635	β = 90
c = 84.035	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
ADSC	data collection
HKL-2000	data reduction
HKL-2000	data scaling
MOLREP	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2007-08-28

Deposition Author(s):

Kukimoto-Niino, M.

Uchikubo-Kamo, T.

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2007-08-28
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2021-11-10
Changes: Database references
Version 1.3: 2023-10-25
Changes: Data collection, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.