2DG8 | pdb_00002dg8

Crystal structure of the putative trasncriptional regulator SCO7518 from Streptomyces coelicolor A3(2)

PDB DOI: https://doi.org/10.2210/pdb2DG8/pdb

Classification: GENE REGULATION
Organism(s): Streptomyces coelicolor A3(2)
Expression System: Rhodococcus erythropolis
Mutation(s): No

Deposited: 2006-03-08 Released: 2007-03-13
Deposition Author(s): Hayashi, T., Watanabe, N., Sakai, N., Tamura, T., Yao, M., Tanaka, I.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.21 Å
R-Value Free:
0.247 (Depositor), 0.207 (DCC)
R-Value Work:
0.218 (Depositor), 0.219 (DCC)
R-Value Observed:
0.218 (Depositor)

wwPDB Validation 3D Report Full Report

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This is version 1.3 of the entry. See complete history.

Literature

Crystal structure of the putative transcriptional regulator SCO7518 from Streptomyces coelicolor A3(2)

Hayashi, T., Watanabe, N., Tanaka, Y., Sakai, N., Tamura, T., Yao, M., Tanaka, I.

To be published.

Macromolecule Content

Total Structure Weight: 87.93 kDa
Atom Count: 5,739
Modeled Residue Count: 698
Deposited Residue Count: 772
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
putative tetR-family transcriptional regulatory protein	A, B, C, D	193	Streptomyces coelicolor A3(2)	Mutation(s): 0
UniProt
Find proteins for Q93J02 (Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)) Explore Q93J02 Go to UniProtKB: Q93J02
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q93J02
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.21 Å
R-Value Free: 0.247 (Depositor), 0.207 (DCC)
R-Value Work: 0.218 (Depositor), 0.219 (DCC)
R-Value Observed: 0.218 (Depositor)

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 51.336	α = 90
b = 101.262	β = 98.6
c = 76.914	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
HKL-2000	data reduction
SCALEPACK	data scaling
SOLVE	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2007-03-13

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2007-03-13
Type: Initial release
Version 1.1: 2008-04-30
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Source and taxonomy, Version format compliance
Version 1.3: 2024-03-13
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.