23SQ | pdb_000023sq

TamA complex with TamB DUF490 in detergent micelles.


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.51 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

Validation slider image for 23SQ

This is version 1.0 of the entry. See complete history

Literature

Mechanism of phospholipid transport to the bacterial outer membrane by TAM.

Eisenhuth, A.G.Adamson, L.S.R.Zhang, C.Abbas, G.S.K.North, R.A.Leyton, D.L.Bernstein, H.D.Brown, S.H.J.Stewart, A.G.Bailey, C.B.Don, A.S.Grosas, A.B.Doyle, M.T.

(2026) bioRxiv 

  • DOI: https://doi.org/10.64898/2026.03.22.713439
  • Primary Citation Related Structures: 
    23SP, 23SQ

  • PubMed Abstract: 

    Gram-negative bacteria transport phospholipids from the inner membrane (IM) to the outer membrane (OM) via poorly understood processes. These processes are essential for cell growth and the establishment of an antibiotic-resistant barrier. Here, we conducted single-particle cryo-electron microscopy, in vivo functional assays, and lipidomics to investigate the role of the "translocation and assembly module" (TAM) in lipid transport. We found that the OM-embedded subunit TamA anchors the IM-embedded bridge-like subunit TamB to the OM by forming a functional stable hybrid-barrel structure with the highly conserved C-terminal domain of unknown function 490 (DUF490). Using in vivo disulfide-tethering experiments we found that a highly conserved amphipathic helix within TamB DUF490 is important for TAM to function in OM maintenance. We also found that TamB DUF490 forms a β-taco channel containing lipid-like densities and that the lipophilic property of the channel is important for TAM to maintain the levels of cardiolipin in the OM. Not only do our data support a novel model in which TAM acts to direct specific lipid classes into the OM, but it also supports the notion that TamB is a bacterial evolutionary prototype of a structurally homologous superfamily of eukaryotic bridge-like lipid transfer proteins.


  • Organizational Affiliation
    • Centre for Drug Discovery Innovation, The University of Sydney, Sydney, NSW, Australia.

Macromolecule Content 

  • Total Structure Weight: 112.96 kDa 
  • Atom Count: 7,627 
  • Modeled Residue Count: 978 
  • Deposited Residue Count: 1,027 
  • Unique protein chains: 2

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Translocation and assembly module subunit TamBA [auth B]455Escherichia coliMutation(s): 0 
Gene Names: tamBytfNytfOb4221JW4180
UniProt
Find proteins for P39321 (Escherichia coli (strain K12))
Explore P39321 
Go to UniProtKB:  P39321
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP39321
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
Translocation and assembly module subunit TamAB [auth A]572Escherichia coliMutation(s): 0 
Gene Names: tamAyftMytfMb4220JW4179
UniProt
Find proteins for P0ADE4 (Escherichia coli (strain K12))
Explore P0ADE4 
Go to UniProtKB:  P0ADE4
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0ADE4
Sequence Annotations
Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.51 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.21.2_5419
RECONSTRUCTIONcryoSPARC4.7.0

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Australian Research Council (ARC)AustraliaDP260100880

Revision History  (Full details and data files)

  • Version 1.0: 2026-06-03
    Type: Initial release