Structure of plasmepsin II in complex of an pepstatin analogue
Prade, L.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Plasmepsin 2 | 329 | Plasmodium falciparum | Mutation(s): 0  EC: 3.4.23.39 | ||
UniProt | |||||
Find proteins for P46925 (Plasmodium falciparum (isolate HB3)) Explore P46925  Go to UniProtKB:  P46925 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P46925 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
5FE Query on 5FE | C [auth A], D [auth B] | 5,5,5-TRIFLUORO-3-HYDROXY-4-[2-(5,5,5-TRIFLUORO-3-HYDROXY-4-{3-METHYL-2-[3-METHYL-2-(3-METHYL-BUTYRYLAMINO)-BUTYRYLAMINO]-BUTYRYLAMINO}-PENTANOYLAMINO)-PROPIONYLAMINO]-PENTANOIC ACID METHYL ESTER C29 H47 F6 N5 O9 DBMUWIXNLHQYDY-OCVHHRCCSA-N |
Entity ID: 2 | |||||
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ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_000639 (5FE) Query on PRD_000639 | C [auth A], D [auth B] | bis-trifluoromethyl pepstatin A ester analogue | Peptide-like / Inhibitor |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 141.65 | α = 90 |
b = 141.65 | β = 90 |
c = 98.35 | γ = 120 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
MOSFLM | data reduction |
CCP4 | data scaling |
MOLREP | phasing |