1O20

Crystal structure of Gamma-glutamyl phosphate reductase (TM0293) from Thermotoga maritima at 2.00 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.160 
  • R-Value Observed: 0.163 

wwPDB Validation   3D Report Full Report


This is version 1.6 of the entry. See complete history


Literature

Crystal structure of gamma-glutamyl phosphate reductase (TM0293) from Thermotoga maritima at 2.0 A resolution.

Page, R.Nelson, M.S.von Delft, F.Elsliger, M.A.Canaves, J.M.Brinen, L.S.Dai, X.Deacon, A.M.Floyd, R.Godzik, A.Grittini, C.Grzechnik, S.K.Jaroszewski, L.Klock, H.E.Koesema, E.Kovarik, J.S.Kreusch, A.Kuhn, P.Lesley, S.A.McMullan, D.McPhillips, T.M.Miller, M.D.Morse, A.Moy, K.Ouyang, J.Robb, A.Rodrigues, K.Schwarzenbacher, R.Spraggon, G.Stevens, R.C.van den Bedem, H.Velasquez, J.Vincent, J.Wang, X.West, B.Wolf, G.Hodgson, K.O.Wooley, J.Wilson, I.A.

(2004) Proteins 54: 157-161


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Gamma-glutamyl phosphate reductase427Thermotoga maritimaMutation(s): 3 
Gene Names: TM0293
EC: 1.2.1.41
UniProt
Find proteins for Q9WYC9 (Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
Explore Q9WYC9 
Go to UniProtKB:  Q9WYC9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9WYC9
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.160 
  • R-Value Observed: 0.163 
  • Space Group: C 2 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 105.15α = 90
b = 111.33β = 90
c = 86.83γ = 90
Software Package:
Software NamePurpose
MOSFLMdata reduction
CCP4data reduction
SCALEPACKdata scaling
SOLVEphasing
RESOLVEmodel building
REFMACrefinement
CCP4data scaling
RESOLVEphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2003-04-01
    Type: Initial release
  • Version 1.1: 2008-04-26
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Advisory, Derived calculations, Version format compliance
  • Version 1.3: 2017-10-04
    Changes: Refinement description
  • Version 1.4: 2018-07-18
    Changes: Data collection, Database references
  • Version 1.5: 2023-01-25
    Changes: Database references, Derived calculations
  • Version 1.6: 2024-11-13
    Changes: Data collection, Structure summary