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Crystal structure of Gamma-glutamyl phosphate reductase (TM0293) from Thermotoga maritima at 2.00 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.4 293 15% PEG MME 5000(30%), 0.06M Tris Cl(1M), 0.04M Tris_base(1M), VAPOR DIFFUSION,SITTING DROP,NANODROP, pH 8.40, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.57 51.67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 105.15 α = 90 b = 111.33 β = 90 c = 86.83 γ = 90
Symmetry Space Group C 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 2002-09-20 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 0.9793, 0.9566, 0.9794 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 100 0.087 20.46 8.55 34597
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 99.5 0.607 3.33 7.44
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2 38.22 30837 2521 95.9 0.163 0.16 0.1688 0.203 0.2097 RANDOM 18.69
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.39 1.02 -0.64
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.116 r_scangle_it 4.321 r_scbond_it 2.55 r_angle_refined_deg 1.532 r_mcangle_it 1.49 r_angle_other_deg 0.843 r_mcbond_it 0.816 r_symmetry_vdw_other 0.357 r_symmetry_hbond_refined 0.337 r_nbd_other 0.244
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.116 r_scangle_it 4.321 r_scbond_it 2.55 r_angle_refined_deg 1.532 r_mcangle_it 1.49 r_angle_other_deg 0.843 r_mcbond_it 0.816 r_symmetry_vdw_other 0.357 r_symmetry_hbond_refined 0.337 r_nbd_other 0.244 r_nbd_refined 0.202 r_xyhbond_nbd_refined 0.178 r_symmetry_vdw_refined 0.145 r_chiral_restr 0.093 r_nbtor_other 0.087 r_bond_refined_d 0.016 r_gen_planes_refined 0.007 r_gen_planes_other 0.006 r_bond_other_d 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3227 Nucleic Acid Atoms Solvent Atoms 299 Heterogen Atoms
Software Software Software Name Purpose MOSFLM data reduction CCP4 data reduction SCALEPACK data scaling SOLVE phasing RESOLVE model building REFMAC refinement CCP4 data scaling RESOLVE phasing